Amplicon details

Amplicon:

576 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg
251   ataaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg
301   attaatgatg actcgactga atctgtattt tttatatgaa ttatatgaaa
351   acggaagaat tggtgtgaat agattccaca ttgaagaaag aatcgaatat
401   tcattgatca aatgattcac tccatagtct gatagatctt ttcaagaatt
451   gattaatcgg acgagaataa agatagagtc ccgttctaca tgtcaatgtc
501   ggcaacaatg aaatttatag taagaggaaa atccgtcgac tttaaaaatc
551   gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KF965159.1 nt Aoranthe penduliflora isolate O059 ... 1668 bp Aoranthe penduliflora QL-PLN-00-007 576 bp View
HM164307.1 nt Aoranthe penduliflora voucher Ivers... 1669 bp Aoranthe penduliflora QL-PLN-00-007 576 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.