Amplicon details |
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Amplicon: |
562 bp | |
1 cgaaatcggt agacgctacg gacttgatcg aattgagcct tggtatggaa 51 acctaccaag tgatagcttc caaatccagg gaaccctggg atattttgaa 101 tgggtaatcc tgagccaaat ccggttcatg gagacaatag tttcttcttt 151 tattctccta agataggaag gggataggtg cagagactca atggaagcta 201 ttctaacgaa tgaatctcat ttggtccaat actgtattta tagaacgctc 251 tatttacacc taaaaagtgg gaatgtgata taacatcaga caaaactcgc 301 gatcagaact tgaatcgttc caagcatcta ttcgtaagat agatgccaga 351 ttcgagttga agtactgatt ttacattaag taatccaatt atgaacttct 401 ctactttaga tagagaattg aatcagtttt tggaataaat ggttggacga 451 gaataaagat agagtccaat tctacgtgtc aatgtcaaca acaatgcaaa 501 ttgcagtagg aggaaaatcc gttggcttta tagaccgtga gggttcaagt 551 ccctctatcc cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| EF440534.1 | nt | Picea brachytyla from China tRNA-Th... | 1453 bp | Picea brachytyla | QL-PLN-00-007 | 562 bp | View |
| EF440539.1 | nt | Picea farreri from Myanmar tRNA-Thr... | 1429 bp | Picea farreri | QL-PLN-00-007 | 562 bp | View |
| EF440544.1 | nt | Picea jezoensis from Japan tRNA-Thr... | 1434 bp | Picea jezoensis | QL-PLN-00-007 | 562 bp | View |
| EF440548.1 | nt | Picea mariana from USA tRNA-Thr (tr... | 1434 bp | Picea mariana | QL-PLN-00-007 | 562 bp | View |
| EF440549.1 | nt | Picea martinezii from Mexico tRNA-T... | 1434 bp | Picea martinezii | QL-PLN-00-007 | 562 bp | View |
| EF440554.1 | nt | Picea morrisonicola from Taiwan tRN... | 1434 bp | Picea morrisonicola | QL-PLN-00-007 | 562 bp | View |
| EF440556.1 | nt | Picea omorika tRNA-Thr (trnT) gene,... | 1434 bp | Picea omorika | QL-PLN-00-007 | 562 bp | View |
| EF440557.1 | nt | Picea orientalis from Georgia tRNA-... | 1434 bp | Picea orientalis | QL-PLN-00-007 | 562 bp | View |
| EF440560.1 | nt | Picea pungens from USA tRNA-Thr (tr... | 1434 bp | Picea pungens | QL-PLN-00-007 | 562 bp | View |
| EF440563.1 | nt | Picea rubens from USA tRNA-Thr (trn... | 1434 bp | Picea rubens | QL-PLN-00-007 | 562 bp | View |
| EF440566.1 | nt | Picea smithiana from Afghanistan tR... | 1429 bp | Picea smithiana | QL-PLN-00-007 | 562 bp | View |
| EF440567.1 | nt | Picea spinulosa from Bhutan tRNA-Th... | 1429 bp | Picea spinulosa | QL-PLN-00-007 | 562 bp | View |
| EF440532.1 | nt | Picea alcoquiana from Japan tRNA-Th... | 1434 bp | Picea alcoquiana | QL-PLN-00-007 | 562 bp | View |
| EF440561.1 | nt | Picea purpurea from China tRNA-Thr ... | 1434 bp | Picea purpurea | QL-PLN-00-007 | 562 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.