Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tancgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CQ876988 nrnl1 Sequence 34 from Patent WO200408121... 12633 bp unidentified QL-ELE-00-006 180 bp View
GM007886.1 emblrelpat Sequence 34 from Patent WO2008049865. 12633 bp synthetic construct QL-ELE-00-006 180 bp View
CQ876988.1 emblrelpat Sequence 34 from Patent WO2004081217. 12633 bp synthetic construct QL-ELE-00-006 180 bp View
GM007888.1 emblrelpat Sequence 36 from Patent WO2008049865. 12776 bp synthetic construct QL-ELE-00-006 180 bp View
CQ876990.1 emblrelpat Sequence 36 from Patent WO2004081217. 12776 bp synthetic construct QL-ELE-00-006 180 bp View
GZ793483.1 emblrelpat Sequence 34 from patent US 8373022. 12633 bp unidentified QL-ELE-00-006 180 bp View
GZ793485.1 emblrelpat Sequence 36 from patent US 8373022. 12776 bp unidentified QL-ELE-00-006 180 bp View
NRN_CQ876990 nrnl1 Sequence 36 from Patent WO200408121... 12776 bp unidentified QL-ELE-00-006 180 bp View
GZ793485.1 emblrelpat Sequence 36 from patent US 8373022. 12776 bp unidentified QL-ELE-00-007 180 bp View
NRN_CQ876990 nrnl1 Sequence 36 from Patent WO200408121... 12776 bp unidentified QL-ELE-00-007 180 bp View
NRN_CQ876988 nrnl1 Sequence 34 from Patent WO200408121... 12633 bp unidentified QL-ELE-00-007 180 bp View
GZ793483.1 emblrelpat Sequence 34 from patent US 8373022. 12633 bp unidentified QL-ELE-00-007 180 bp View
CQ876988.1 emblrelpat Sequence 34 from Patent WO2004081217. 12633 bp synthetic construct QL-ELE-00-007 180 bp View
CQ876990.1 emblrelpat Sequence 36 from Patent WO2004081217. 12776 bp synthetic construct QL-ELE-00-007 180 bp View
GM007886.1 emblrelpat Sequence 34 from Patent WO2008049865. 12633 bp synthetic construct QL-ELE-00-007 180 bp View
GM007888.1 emblrelpat Sequence 36 from Patent WO2008049865. 12776 bp synthetic construct QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.