Amplicon details

Amplicon:

559 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggtgaaaaa
151   aggataggtg cagagactca acgggagctg ttctaacaaa tggagttggc
201   tgcgttagta gagaaatctt tccatctaaa attacgaaag gataaagtga
251   aggatagacg tatatatacg tattgaatac tatatcaaat gattaatgag
301   gactcgacta aatttgtatt ttttatatga aaaagggaag aattggtgtg
351   aatagattcc acattgaaga aagaatcgaa tattcattga tcaaatgatt
401   cactccatag tctgatagat cttttcaaga attgattaat cggacgagaa
451   taaagataga gtcccattct acatgtcaat gttggcaaca atgaaattta
501   tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc
551   tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FM207129.1 nt Nematostylis anthophylla chloroplas... 1606 bp Nematostylis anthophylla QL-PLN-00-007 559 bp View
FM207131.1 nt Nematostylis anthophylla chloroplas... 944 bp Nematostylis anthophylla QL-PLN-00-007 559 bp View
FM207132.1 nt Nematostylis sp. Razafimandimbison ... 1551 bp Nematostylis sp. Razafimandimbison & Ravelonarivo 616 QL-PLN-00-007 559 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.