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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 522 bp 
1     cgaaatcggt agacgctacg gacttaatag aattgagcct tggtatggaa
51    acttactaag tgatagcttc caaatacagg ggaaccctgg aatattttga
101   atgggcaatc ctgatccaaa tccgtattat aggaacaata attttatttt
151   ctagaaaagg gataggtgca gagactcaac ggaagatatt ctaacgactt
201   aatatcattt gaatttgaac caatattcta tctacagagt gtagtatgtt
251   attgaaaact ttgaaagtgt tctgtatcat cgttaaaact tgtttcaacg
301   attagaactt gagttgttct aggcttgcct agcttaatga atacttaatt
351   aaagtaattc aattaagaaa taaatagaat ttattctatt tttgaattat
401   tggacgagga taaagataga gtccaattct acatgtaaat gccaacaaca
451   acaatgcaaa ttgcagtagt cggaaaatcc gttggtttta taaaccgtga
501   gggttcaagt ccctctatcc cc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU052218.1 nt Taxus wallichiana var. wallichiana ... 881 bp Taxus wallichiana var. wallichiana QL-PLN-00-007 522 bp View
KJ768336.1 nt Taxus wallichiana isolate KA02 tRNA... 861 bp Taxus wallichiana QL-PLN-00-007 522 bp View
KJ768337.1 nt Taxus wallichiana isolate KD14 tRNA... 882 bp Taxus wallichiana QL-PLN-00-007 522 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.