Amplicon details

Amplicon:

602 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acctaccaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc ctgttttccg aaaacaaaga agagttcaaa
151   aagtgagaat aaaaaggata ggtgcagaga ctcaacggaa gctgttctaa
201   caaatggagt tgacgggatt tcgtttcatt agtaagtaaa gtaatccttc
251   catcgaaact ccagaaaaga aaggatcaaa gagaaaggta tatatacgta
301   tacgtaccga aatactatct caactaaatt aatgacgacg ccgaatctct
351   attttttaat atttatataa gaaatgaaag atgtaaatcg attcaaatca
401   aagttgagga aagagtcgaa tattcattca tcaaatcatt cactccatca
451   taatccgata gatcttttga agaaccgatt aatcggacaa gaataaagat
501   agagtcccat tctacatgtc aatgctgaca acaatgaaat ttatagtaag
551   aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc
601   cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ801073.1 nt Bauhinia ungulata voucher Redden 10... 1045 bp Bauhinia ungulata QL-PLN-00-007 602 bp View
FJ801097.1 nt Bauhinia pulchella voucher Anderson... 1086 bp Bauhinia pulchella QL-PLN-00-007 602 bp View
FJ801098.1 nt Bauhinia rufa voucher Pennington 48... 1052 bp Bauhinia rufa QL-PLN-00-007 602 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.