Amplicon details

Amplicon:

597 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acctaccaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc cagttttccg aaaacaaaga agagttcaaa
151   aagttagaat aaaaaggata ggtgcagaga ctcaacggaa gctgttctaa
201   caaatggagt tgacgggatt tcgtttcatt agtaaagtaa tccttccatc
251   gaaactccag aaaagaaagg atcaaagata aacgtatata tagtatacgt
301   cccgaaatac tatctcaact aaattaatga cgacgccgaa tctctatttt
351   tgaatattta tataagaaat gaaagatgta aatcgattca aatcaaagtt
401   gaggaaagag tcgaatattc attcatcaaa tcattcactc catcataatc
451   cgatagatct tttgaagaac cgattaatcg gacaagaata aagatagagt
501   cccattctac atgtcaatgc tgacaacaat gaaatttata gtaagaggaa
551   aatccgtcga ctttaaaaat cgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ801053.1 nt Bauhinia forficata subsp. pruinosa ... 1047 bp Bauhinia forficata subsp. pruinosa QL-PLN-00-007 597 bp View
FJ801113.1 nt Bauhinia forficata voucher Sinou s.... 1043 bp Bauhinia forficata QL-PLN-00-007 597 bp View
FJ801094.1 nt Bauhinia forficata voucher McDiarmi... 1077 bp Bauhinia forficata QL-PLN-00-007 597 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.