Amplicon details

Amplicon:

617 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   tttcgaaaaa gaagggcttt atacatctaa taaacacgta tcgatactga
301   catagcaaac gattaatcac agaaccaata ttataatatt ggttctttat
351   tcttttttag aatgaaatag aaatgattat gaaataaaaa attctgaatt
401   tttttagaat tattgtattg tgaatccatt ccaatcgaat atttagtaat
451   caaatccttc aattcaaagt tttgaggtct ttaaaaaagt ggattaatcg
501   gacgaggaca aagagagagt cccattctac atgtcaatac tgacaacaat
551   gaaatttcta gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt
601   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU792456.1 nt Poa kerguelensis voucher Hennion Ge... 1867 bp Poa kerguelensis QL-PLN-00-007 617 bp View
EU792457.1 nt Poa kerguelensis voucher Hennion Ge... 1866 bp Poa kerguelensis QL-PLN-00-007 617 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.