Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acgcactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaacaa aggttcagaa
151   agttaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttggct gcgttagtag ataaatcttt ccatctaaaa ttccgaaagg
251   ataaagtgaa ggatacacgt atatattacg tattgaatac tatatcaaat
301   gattaatgac gactcgaatg aatctgtatt tttttatgaa aacggaagaa
351   ttggtgtgaa tagattccac attgaagaaa gaatcgaata ttaattgatc
401   aaatgattca ctccatagtc tgatacatct tttcaagaat tgattaatcg
451   gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat
501   gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU817454.1 nt Augusta austrocaledonica trnT-trnL ... 1703 bp Augusta austrocaledonica QL-PLN-00-007 567 bp View
KY492076.1 nt Augusta austrocaledonica chloroplas... 128701 bp Augusta austrocaledonica QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.