Amplicon details

Amplicon:

598 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aactaaaaat
101   gggcaatcct gagccaaatc tttatgttta gaaaaacaag ggtttaaaaa
151   ctagactaga ataaaaaggg ataggtgcag agactcaatg gaagctgttc
201   taacgaatgg agttgactac gttgcattga taataggaat ccttctatta
251   tcgaaattaa aaaaaggtga cccatatatc taatacgtac gtatacatac
301   tgacatatca aacgattaat cacgactcga atccatatac atatattata
351   tatatgcgca atatatgcaa aattaagtgt ggatctattc caatcgaagt
401   tgacggaaga atcaaatatt cagtgatcaa atcattcatt ccagagttta
451   atagaccctt ttttgaaaaa ctgattaatc ggacgagaat aaagagagag
501   tcccattcta catgtcaata ccgacaacaa tgaaatttat agtaagagga
551   aaatccgtcg actttagaaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AM909708.1 nt Ornithogalum arabicum chloroplast t... 1053 bp Ornithogalum arabicum QL-PLN-00-007 598 bp View
AM909706.1 nt Ornithogalum arabicum chloroplast t... 1002 bp Ornithogalum arabicum QL-PLN-00-007 598 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.