Amplicon details

Amplicon:

553 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgagaacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   aacgacaaag ggggataggt gcagagactc aatggaagtt gttctaacaa
201   atggagttga ctgtgtgggt agaggaatct ttccatcgaa acttccgaaa
251   ggatgaagga taaacgtatc tattgaatac tctatcaaat gattaatgag
301   gtgtatctgt attttttgat atgaaaaatg gaagaattgg tgtgaattga
351   ttccacattg aagaaagaat cgaatattcc ttgatcaact cattcactcc
401   atagtccgat aaatctttta aagaactgat taatcggacg agaataaaga
451   tagagtccca ttctacatgt caatatcggc aacaatgaaa tttattgtaa
501   gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag tccctctatc
551   ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF571560.1 nt Junellia minima voucher R. G. Olmst... 1599 bp Junellia minima QL-PLN-00-007 553 bp View
EF571562.1 nt Junellia uniflora voucher R. G. Olm... 1593 bp Junellia uniflora QL-PLN-00-007 553 bp View
EF571563.1 nt Junellia juniperina voucher R. G. O... 1597 bp Junellia juniperina QL-PLN-00-007 553 bp View
EF571564.1 nt Junellia juniperina voucher R. G. O... 1599 bp Junellia juniperina QL-PLN-00-007 553 bp View
EF571559.1 nt Junellia connatibracteata voucher R... 1590 bp Junellia connatibracteata QL-PLN-00-007 553 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.