Amplicon details

Amplicon:

557 bp
1     cgaaatcggt agacgctacg gacttgatcg aattgagcct tggtatggaa
51    acctaccaag tgatagcttc caaattcagg gaaccccggg atattttgaa
101   tgggtaatcc tgagccaaat ccggttcata gagacaatgg tttctttcct
151   aggataggaa ggggataggt gcagagactc aatggaagct attctaacga
201   atgaatttca tttggggtcc aatactctat ttatagaacg ctttatttac
251   acctcgaaag tgggaatgtt gtataaaaaa aaacaacact cgcgatcaga
301   acttgaatcg tttcaagcat tttatttgta aaagaaatgc cagatttgag
351   ttgaagtaat gatttgacat taagtaatcc aattatgaac tttctctact
401   ctagataggg agttgaatca gtttttggaa gaaattattg gacgaggata
451   aagatagagt ccaattctac gtgtcaatgt caacaacaat gcaaattgca
501   gtaggaggaa aatccgttgg ctttatagac cgtgagggtt caagtccctc
551   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF395432.1 nt Tsuga chinensis voucher YU Havill 0... 1459 bp Tsuga chinensis QL-PLN-00-007 557 bp View
EF395433.1 nt Tsuga chinensis voucher HAST 17352 ... 1478 bp Tsuga chinensis QL-PLN-00-007 557 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.