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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 611 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacctgg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   ttcgagaagg aagggcttta tacatctaat aaacacctat agatactgcc
301   atagcaaagg attaatcaca gaacccatat tataatatag gttctttatt
351   cttttttaga atcaaataga aatgattatg aaataaaaaa ttcataattt
401   ttttagaatt attgtgaatc cattcccatc gaatatttag taatcaaatc
451   cttcaattca aagttttgag gtctttaaaa aagtagatta atcgaacgag
501   gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt
551   tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc
601   cctctatccc c

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OK247981.1 nt Puccinellia nipponica trnT-trnL int... 1706 bp Puccinellia nipponica QL-PLN-00-007 611 bp View
DQ353960.1 nt Puccinellia glaucescens voucher Sor... 1773 bp Puccinellia glaucescens QL-PLN-00-007 611 bp View
OK247969.1 nt Puccinellia biflora trnT-trnL inter... 1708 bp Puccinellia biflora QL-PLN-00-007 611 bp View
OK247972.1 nt Puccinellia distans trnT-trnL inter... 1706 bp Puccinellia distans QL-PLN-00-007 611 bp View
OK247975.1 nt Puccinellia glauca trnT-trnL interg... 1706 bp Puccinellia glauca QL-PLN-00-007 611 bp View
OK247978.1 nt Puccinellia hauptiana trnT-trnL int... 1706 bp Puccinellia hauptiana QL-PLN-00-007 611 bp View
MN480774.1 nt Puccinellia hauptiana voucher Alt78... 906 bp Puccinellia hauptiana QL-PLN-00-007 611 bp View
MN480777.1 nt Puccinellia tenuiflora voucher Alt2... 906 bp Puccinellia tenuiflora QL-PLN-00-007 611 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.