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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 180 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_AX047311 nrnl1 Sequence 25 from Patent WO0068374. ... 12766 bp unidentified QL-ELE-00-007 180 bp View
AY737283.1 nt C-terminal TAP T-DNA vector pYL436,... 12607 bp C-terminal TAP T-DNA vector pYL436 QL-ELE-00-007 180 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QL-ELE-00-007 180 bp View
NRN_AX047311 nrnl1 Sequence 25 from Patent WO0068374. ... 12766 bp unidentified QL-ELE-00-007 180 bp View
AY836546.1 nt T-DNA vector pDs-Lox, complete sequ... 9882 bp T-DNA vector pDs-Lox QL-ELE-00-007 180 bp View
JA841922.1 emblrelpat Sequence 776 from Patent EP2279258. 277 bp synthetic construct QL-ELE-00-007 180 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-007 180 bp View
NRN_BD394368 nrnl1 A construct capable of release in c... 2315 bp unidentified QL-ELE-00-007 180 bp View
DQ225747.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NB QL-ELE-00-007 180 bp View
BD272357.1 emblrelpat Regulatory sequences useful for gen... 6694 bp Zea mays QL-ELE-00-007 180 bp View
DQ225748.1 nt Gene trapping Ds/T-DNA vector pNU39... 19278 bp Gene trapping Ds/T-DNA vector pNU393A1 QL-ELE-00-007 180 bp View
DQ225748.1 nt Gene trapping Ds/T-DNA vector pNU39... 19278 bp Gene trapping Ds/T-DNA vector pNU393A1 QL-ELE-00-007 180 bp View
NRN_CS592919 nrnl1 Sequence 147 from Patent WO2007039454. 13359 bp unidentified QL-ELE-00-007 180 bp View
LT724931.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00660 QL-ELE-00-007 180 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-007 180 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-007 180 bp View
NRN_CQ887764 nrnl1 Sequence 45 from Patent WO200406335... 19491 bp unidentified QL-ELE-00-007 180 bp View
JA843546.1 emblrelpat Sequence 1 from Patent WO2012066147. 11618 bp synthetic construct QL-ELE-00-007 180 bp View
HC185830.1 emblrelpat Sequence 94615 from Patent WO200913... 9769 bp Glycine max QL-ELE-00-007 180 bp View
NRN_CS592963 nrnl1 Sequence 191 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-007 180 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.