Amplicon details

Amplicon:

581 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ccgaaaacaa agaaaggttc
151   agaaagcaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggggtt gactgcattg gtcgaggaat ctttctatcg agacttcaga
251   aaggatgaag gataaacgta tatacatatg tattcaatac tctatcaaat
301   gaaatgatta atgacgaccc taatctgttc tgtttttttt atgaaaaaaa
351   aggaagaatt ggtgtgaatc gattccacat tgaagttgaa gaaagaaccg
401   aatattcatt gatcaaatca ctcactccat agtctgatag ttcttttgaa
451   gaactgatta atcggacgag aataaagata gagtcccgtt ctacatgtca
501   ataccggcaa caatgaaatt tatagtaaga ggaaaatccg tcgactttaa
551   aaatcgtgag ggttcaagtc cctctatccc c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF688828.1 nt Heliotropium sinuatum voucher 1972 ... 1055 bp Heliotropium sinuatum QL-PLN-00-007 581 bp View
EF688830.1 nt Heliotropium longistylum voucher 19... 1026 bp Heliotropium longistylum QL-PLN-00-007 581 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.