Amplicon details

Amplicon:

553 bp
1     cgaaatcggt agacgctacg gacttaattg tattgagcct tggtatggaa
51    acttactaag tggataactt tcaaattcag agaaaccctg gaataaaaaa
101   ggggcaatcc tgagccaaat ccgatttttt gaaatgaaaa aaaagtttat
151   atagacagaa taaataaaaa aggataggtg cagagactca atggaagctg
201   ttctaataaa tggagttgac tgtcttgcat tagtaaagta agggaacctt
251   tcgttaaaat tgcggattca aagtaaagga taaccctata aatacatata
301   cgtactgaaa gactatctca aataattaat gtaattatga aaaataaaat
351   aaaaatattg aatcgatttc aagttgaaga aaaaatcgat tgatcaaatc
401   attcactcca cagtctgata aataactaat taatcggacg agaataaaga
451   tagagtccca ttctacatgt taatattgac aacaaggaaa tttatagtaa
501   gaggaaaatc cgtcgacttt agaaatcgtg agggttcaag tccctctatc
551   ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ787744.1 nt Viola chaerophylloides voucher KWNU... 958 bp Viola chaerophylloides QL-PLN-00-007 553 bp View
DQ787748.1 nt Viola chaerophylloides voucher KWNU... 958 bp Viola chaerophylloides QL-PLN-00-007 553 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.