Amplicon details

Amplicon:

590 bp
1     cgaaatcggt agacgctacg acttattgga ttgagccttg gtatggaacc
51    ttactaagtg agaactttca aattcagaga aaccctggaa ttaacaatgg
101   gcaatcctga gccaaatcct gttttccgaa aaccaataag agttcagaaa
151   gggagaataa aaaaaggata ggtgcagaga ctcaacggaa gctgttctaa
201   caaatggagt tgacgacatt tcttttcgtt agtaaaggaa tccttccatc
251   taaactccag aaaagaaagg atcaaggatg aacatatata tgtatactga
301   aatattattt caattgatta gaccagacag accaaaaatc tctatttttg
351   aatatttata tgacaaatga aagatgtgaa tagattccaa gttgaagaaa
401   gaatcaaata tttattgatc aaatcattca ttccatgata gtatgataaa
451   tcttttgaag aactgattaa tcggacgaga ataaagatag agtcccattc
501   tacatgtcaa taccgacaac aatgaaattt agagtaagag gaaaatccgt
551   cgactttaga aatcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ208887.1 nt Caesalpinia hintonii isolate Inf10 ... 937 bp Erythrostemon hintonii QL-PLN-00-007 590 bp View
DQ208889.1 nt Caesalpinia hintonii isolate PLA2 t... 995 bp Erythrostemon hintonii QL-PLN-00-007 590 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.