Amplicon details

Amplicon:

576 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgagaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgtgttcag aaaacaaggt tcagaaagcg
151   agaatcaaaa acagaaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacaaata tagtttactg cattggtagg ggaattcttt ccttctatcc
251   aaacgacaga aaggatgacc ttgtctacgt acgtatacat actgaaacat
301   caaacgatta atcacgactc aaatcagtct ttttttatat gaaaaatttc
351   agaatagaag gattgtgatt tgattccaag ttgaaggaag aatcgaatat
401   tcagagatca aatcattcat tcccgagtct aatagatctt tagaataatt
451   gattaatcgg acgagaataa agatagagtc ccattctaca tgtcaataca
501   gacaacaatg aaatttatag taagaggaaa atccgtcgac tttaaaaatc
551   gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY319139.1 nt Polyalthia cf. longifolia Mols 14 t... 980 bp Monoon cf. longifolium Mols 14 QL-PLN-00-007 576 bp View
EU522180.1 nt Monoon longifolium tRNA-Leu (trnL) ... 1008 bp Monoon longifolium QL-PLN-00-007 576 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.