Amplicon details

Amplicon:

562 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctactaag tgagaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ctgtgttcag aaagcgagaa tcaaaaacag
151   aaaaaggata ggtgcagaga ctcaatggaa gccgttctaa caaatagagt
201   tgactgcatt ggtaggggaa ttctttcctt ctatccaaac gacagaaagg
251   atgaccttgt atacgtacgt atacatactg aaacatcaaa cgattaatca
301   cgactcgaat cagtcttttt ttctatgaaa aatttcagaa tagaaggatt
351   gtgatttgat tccaagttga aggaggaatc gaatattcag agatcaaatc
401   attcattccc gagtctaata gatctttaga ataactgatt aatcggacga
451   gaataaagat agagtcccat tctacatgtc aatacagaca acaatgaaat
501   ttatagtaag aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt
551   ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY319096.1 nt Miliusa campanulata tRNA-Leu (trnL)... 958 bp Miliusa campanulata QL-PLN-00-007 562 bp View
AY319097.1 nt Miliusa cuneata tRNA-Leu (trnL) gen... 958 bp Miliusa cuneata QL-PLN-00-007 562 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.