Amplicon details

Amplicon:

597 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagtct taatatggaa
51    acctactaag tgataacttt caaattcagg gaaaccctgg aataaaaaat
101   gggcaatcct gagccaaatc ctgttttccg aaaacaacca agggttcaga
151   aaacgataat aaaaaaagga aaggataggt gcagagactc aatggaagct
201   gttctaacaa aaacaaatgg agttgactat gttgcgttgt taaacgaatc
251   cttccatcaa aactccagaa ccagaaagga tgaaggataa acctatatac
301   ataggtactg aaatattata tcaaatgatt aatgatggct cgaatctgta
351   ttttttgata tgaaaaatga aagaattgtt gtaaatcgat tccaagttga
401   agaaagaaaa gaatcgaata ttcattgatc aaatcattca ctccatagtc
451   cgatagatct tttgaagaac tgattaatcg gacgagaata aagatagagt
501   cccattctac atgtcaatac cgacaacaat gaaatttata gtaagaggaa
551   aatccgtcga ctttaaaaat cgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB234983.1 nt Ampelocissus gracilis chloroplast D... 1012 bp Ampelocissus gracilis QL-PLN-00-007 597 bp View
AB234986.1 nt Ampelocissus polystachya chloroplas... 1014 bp Ampelocissus polystachya QL-PLN-00-007 597 bp View
AB234981.1 nt Ampelocissus elegans chloroplast DN... 1033 bp Ampelocissus elegans QL-PLN-00-007 597 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.