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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 559 bp 
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaat gaaaaaggga taggtgcaga gactcaatgg aagctgttct
201   aacaaatgga gttggctgcg ttagtagaga aatctttcta tcgaaaattc
251   cgaaaggata aaacgtatac gtattgaata ctatatcaaa tgattaatga
301   cgactcgact gaatctgtat tttttatatg aaaatggaag aattggtgtg
351   aatagattcc acattgaaga aagaatcgaa tattcattga ttaaatgatt
401   cactccatag tctgatagat cttttcaaga attgattaat cggacgagaa
451   taaagataga gtcccgttct acatgtcaat gtcggcaaca atgaaattta
501   tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc
551   tctatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ620127.1 nt Afrocanthium lactescens chloroplast... 1743 bp Afrocanthium lactescens QL-PLN-00-007 559 bp View
AJ620130.1 nt Afrocanthium parasiebenlistii chlor... 1726 bp Afrocanthium parasiebenlistii QL-PLN-00-007 559 bp View
AJ620133.1 nt Afrocanthium siebenlistii chloropla... 1748 bp Afrocanthium siebenlistii QL-PLN-00-007 559 bp View
KF488260.1 nt Afrocanthium siebenlistii voucher V... 1699 bp Afrocanthium siebenlistii QL-PLN-00-007 559 bp View
KF488261.1 nt Afrocanthium siebenlistii voucher V... 1699 bp Afrocanthium siebenlistii QL-PLN-00-007 559 bp View
AJ620126.1 nt Afrocanthium keniense chloroplast t... 1753 bp Afrocanthium keniense QL-PLN-00-007 559 bp View
KF488257.1 nt Afrocanthium lactescens voucher Ver... 1722 bp Afrocanthium lactescens QL-PLN-00-007 559 bp View
KF488258.1 nt Afrocanthium lactescens voucher Ver... 1702 bp Afrocanthium lactescens QL-PLN-00-007 559 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.