Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ608134.1 nt Gossypium hirsutum transgenic line ... 1385 bp Gossypium hirsutum QL-ELE-00-001 195 bp View
AY720434.1 nt Plant expression vector pPESiTc, co... 4153 bp Plant expression vector pPESiTc QL-ELE-00-001 195 bp View
AY720433.1 nt Plant expression vector pPILY, comp... 4153 bp Plant expression vector pPILY QL-ELE-00-001 195 bp View
AY720435.1 nt Plant expression vector pPESiTb, co... 4152 bp Plant expression vector pPESiTb QL-ELE-00-001 195 bp View
AY720436.1 nt Plant expression vector pPESiTa, co... 4151 bp Plant expression vector pPESiTa QL-ELE-00-001 195 bp View
AY720438.1 nt Plant expression vector pMENCHU, co... 4152 bp Plant expression vector pMENCHU QL-ELE-00-001 195 bp View
AY720439.1 nt Plant expression vector pLOLA, comp... 4156 bp Plant expression vector pLOLA QL-ELE-00-001 195 bp View
AY720440.1 nt Plant expression vector pGIGI, comp... 4157 bp Plant expression vector pGIGI QL-ELE-00-001 195 bp View
DQ211685.1 nt Cauliflower mosaic virus P6 transac... 1800 bp Cauliflower mosaic virus QL-ELE-00-001 195 bp View
AB267705.1 nt Moss transformation vector pTN86 DN... 2383 bp Moss transformation vector pTN86 QL-ELE-00-001 195 bp View
AB267707.1 nt Moss transformation vector pTN85 DN... 4325 bp Moss transformation vector pTN85 QL-ELE-00-001 195 bp View
EU048863.1 nt Cloning vector pGreenII 0800, T-DNA... 3894 bp Cloning vector pGreenII 0800 QL-ELE-00-001 195 bp View
EU048866.1 nt Cloning vector pGreenII 0179, T-DNA... 2649 bp Cloning vector pGreenII 0179 QL-ELE-00-001 195 bp View
EU048868.1 nt Cloning vector pGreenII 62-SK, T-DN... 853 bp Cloning vector pGreenII 62-SK QL-ELE-00-001 195 bp View
EU048869.1 nt Cloning vector pGreenII 0229 62-SK,... 1991 bp Cloning vector pGreenII 0229 62-SK QL-ELE-00-001 195 bp View
AB472844.1 nt Moss transformation vector pPIG1HG ... 9735 bp Moss transformation vector pPIG1HG QL-ELE-00-001 195 bp View
GQ497230.1 nt Binary vector pEAQexpress, complete... 6889 bp Binary vector pEAQexpress QL-ELE-00-001 195 bp View
GQ497232.1 nt Binary vector pEAQspecialK, complet... 8643 bp Binary vector pEAQspecialK QL-ELE-00-001 195 bp View
GQ497233.1 nt Binary vector pEAQspecialKm, comple... 8643 bp Binary vector pEAQspecialKm QL-ELE-00-001 195 bp View
GQ497234.1 nt Binary vector pEAQ-HT, complete seq... 10003 bp Binary vector pEAQ-HT QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.