Match details
Record ID: |
LT727395.1 |
Database: |
nt |
Go to original record |
Description: |
Mammalian expression vector pCR3VSV-CED-4, complete sequence |
Taxon: |
Mammalian expression vector pCR3VSV-CED-4 |
Original size: |
6734 bp |
View other 1 match for this record
View other 59426 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
4312 |
4520 |
- |
209 bp |
|
1 ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51 cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101 acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151 aggatgatca agagcatcag gggctcgcgc cagccgaact gttcgccagg
201 ctcaaggcg
View other 131 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
2.97e-09 |
primerB |
100.0 |
21 bp |
0 |
0 |
209 |
189 |
2.97e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.