Match details
Record ID: |
PP112995.1 |
Database: |
nt |
Go to original record |
Description: |
Meconopsis torquata chloroplast, complete genome. |
Taxon: |
Meconopsis torquata |
Original size: |
153290 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
46696 |
47294 |
+ |
599 bp |
|
1 cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101 gggcaatcct gagccaaatc ctgttttcag aaaacaaatt aagggatttc
151 tgaaagcgag aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201 tctaatgaat ggagttgact gcgttggtag aggaatcctt ctattaaatt
251 tgaattgaaa ctccataaag aatgagggat gaacctatat acgatacgta
301 cgtatacgta ctgaaatatc aaagattcta ttaatgccgc cctaaatata
351 tattttttta cataaaaaaa atataatttt tgtgaatcta ttccaagttg
401 aaggaagaat tgaaaattca gtgatcaaac cattcactcc atagtctgat
451 agatcttttg acgaactgat taatcggacg agaataaaga tagagtccca
501 ttctacatgt caatatcaat accgacaaca atgaaattta tagtaagagg
551 aaaatccgtc gactttagaa atcgtgaggg ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.70e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
599 |
580 |
2.70e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.