Match details
Record ID: |
ON121987.1 |
Database: |
nt |
Go to original record |
Description: |
Verbascum songaricum chloroplast, complete genome. |
Taxon: |
Verbascum songaricum |
Original size: |
153291 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47821 |
48387 |
+ |
567 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctatttt ctcaaaacaa aggttcagaa
151 ggcgaaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat
201 ggagttgact gcgttggtag aggaatcttt tcatcgaaac ttcagaaagg
251 gtgacggata aacgtatcta ttgaatacta tatcaaatga ttaatgatgg
301 cccgaatctg tatctttttt tttttttata tgaaaaatgg aaaaatcgat
351 gtgaatttat tccacattga agaaagaatc aaataaaata ttcattcatc
401 aaatcattca ctccatagtc tgatagatct tttaaagaac tgattaatcg
451 gacgagaata aagatagagt cccattctac atgtcaatat cggcaacaat
501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551 caagtccctc tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.55e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
567 |
548 |
2.55e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.