Match details
Record ID: |
KP326389.1 |
Database: |
nt |
Go to original record |
Description: |
Salvia moorcroftiana voucher mo.39 tRNA-Leu (trnL) gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast. |
Taxon: |
Salvia moorcroftiana |
Original size: |
896 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
552 |
+ |
552 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa
151 aacaaaaaaa aggataggtg cagagactca atggaagctg ttctaacaaa
201 tggagttgac tgcgccggta gaggattcca tggaaacttt agaaaggatg
251 aaggataaac acatctattg aatactatat taaatgatta atgttgaccc
301 gaatctgttt ttttaatatg aaaatgaaaa aataggtgtg aatttatttc
351 acgttgaaga ataaatcgaa tattcctcaa ttcattcact ccatagtccg
401 atagatcttt taaagaactt attaatcgga cgagaataaa gatagagtcc
451 cattctacat gctacatgtc aataccggca acaatgaaat ttatggtaag
501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc
551 cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.48e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
552 |
533 |
2.48e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.