Match details
Record ID: |
OR823819.1 |
Database: |
nt |
Go to original record |
Description: |
Linaria japonica voucher cKim 2023-1[HNIBR] chloroplast, complete genome. |
Taxon: |
Linaria japonica |
Original size: |
150660 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45189 |
45747 |
+ |
559 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151 agcaaaaaag ggataggtgc agagactcaa cggaagctgt tctaacaaat
201 ggagttgact atgttggtag aggaatcttt ccatcaaaac ttcagaaagg
251 atgaaggata aatggatcta ttgaaaacta tatcaaatga ttaatgatgg
301 cccaaatctg tatctgtttt ttttatataa aaaatggaag aattgatgtg
351 aattgattcc atattgaaga aagaatcgaa tattcattca tcaaatcatt
401 cactccacag tctggtagtt cttttaaaga actgattaat cggacgagaa
451 taaagataga gtcccattct acatgtcaat accggcaaca attaaattta
501 tagtaagagg aaaatccgtc gacttttaaa atcgtgaggg ttcaagtccc
551 tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.52e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
559 |
540 |
2.52e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.