Match details
Record ID: |
OR743522.1 |
Database: |
nt |
Go to original record |
Description: |
Eremophila sp. (in: birds) isolate BMR07491 chloroplast, complete genome. |
Taxon: |
Eremophila sp. (in: birds) |
Original size: |
151738 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
48230 |
48796 |
+ |
567 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151 agcgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201 aatggagttg actgcgttgg tagaggaatc tttccatcga aacttcagaa
251 agaaaggatg aaggataaag gtatatattg aatactatat caaatgatta
301 atgatggccc taatctgtat ctgtattttt ttatatgaaa aatggaagaa
351 ttggtatgaa gtgattccac attgaagaaa gaatcaaata ttccttcatc
401 aaatcattca ctccacagtc tgatagttct tttaaagaac tgattaatcg
451 gacaagaata aagatagagt cccattctac atgtcaatat tggcaacaat
501 gcaatttata gtaagaggaa aatccgtcga cttttaaaat cgtgagggtt
551 caagtccctc tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.55e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
567 |
548 |
2.55e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.