Match details
Record ID: |
KX373122.1 |
Database: |
nt |
Go to original record |
Description: |
Poincianella placida voucher Lewis 2046 (K) tRNA-Leu (trnL), trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Erythrostemon placidus |
Original size: |
593 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
592 |
+ |
592 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101 gggcaatcct gagccaaatc ctgttttccg aaaaccaata agagttcaga
151 aagggagaat aaaaaaagga taggtgcaga gactcaacgg aagctgttct
201 aacaaatgga gttgacgaca tttcttttcg ttagtaaagg aatccttcca
251 tcgaaactcc agaaaagaaa ggatcaagga tgaacatata tatgtatact
301 gaaatattat ttcaattgat tagaccagac agaccccaaa tctctatttt
351 ttaatattta tatgacaaat gaaagatgtg aatagattcc aagttgaaga
401 aagaatcgaa tatttattga tcaaatcatt cattccatga tagtctgata
451 aatcttttga agaactgatt aatcggacga gaataaagat agagtcccat
501 tctacatgtc aataccgaca acaatgaaat ttagagtaag aggaaaatcc
551 gtcgacttta gaaatcgtga gggttcaagt ccctctatcc cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.67e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
592 |
573 |
2.67e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.