Match details
Record ID: |
OP243282.1 |
Database: |
nt |
Go to original record |
Description: |
Primulina sp. ZYZ-2023b voucher WF216 trnL-trnF intergenic spacer region, partial sequence; chloroplast. |
Taxon: |
Primulina sp. ZYZ-2023b |
Original size: |
972 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
12 |
563 |
+ |
552 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgaagacttt caaattcaga gaaaccctgg aattaataaa
101 aatgggcaat cctgagccaa atccttgttt tctcaaaaca agggttcaga
151 gatcgaaaaa gaggataggt gcagagactc aatggaagct gttctaacaa
201 atggagttga ccacgttggt agaagaattg aaacttcaga aaggatgaag
251 gataagcgta tctattgaat actattgatg attaataatg gcccgaatct
301 gtatctgggt attttctata tgaaaaatag aagaattggt gtgaattgat
351 ttcacattga taaaagaatc gaatatttat tagtcaaacc attcactcca
401 cagtccgata gatctcttaa agaacttatt attcggacga gaataaagat
451 agagtcctgt tctacatgtc aataccgaca acaatgaaac ttatagtaag
501 aggaaaatcc gtcgactttc aaaatcgtga gggttcaagt ccctctatcc
551 cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.48e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
552 |
533 |
2.48e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.