Match details
Record ID: |
ON229548.1 |
Database: |
nt |
Go to original record |
Description: |
Bistorta officinalis voucher SD369 chloroplast, complete genome. |
Taxon: |
Bistorta officinalis |
Original size: |
159714 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47953 |
48555 |
+ |
603 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51 acctactaag tgagaacttt caaattcaga gaaaccctgg aatttaaaac
101 acgggcaatc ctgagccaac tcctgcttta caaaaaggaa gaataaaaaa
151 ggataggtgc agagactcaa tggaagctgt tctaacaaat ggagttgtct
201 gtcatgcatt gtgctatgtt atacgaattc ttacatctaa actccaaaaa
251 ggatgaagaa gaaacctata ggcatacgta cttaatatct taatatataa
301 aatagaattt atttagaata tatctaagat aaaatgaaaa ttgatgacga
351 cccgaatctt tattttatga atatgaacaa atggaagaat tattatgaat
401 cgattccgcg ttgaagaacg aatcgaatat tcgtttctta aattaaagca
451 tttactccac agtctgatag atctaccgat ccatcggatg agaatgaaga
501 gagagtccca ttctacgtgt cactcccgac aacaatgaaa tttatagtaa
551 gaggaaaatc cgtcgacttt taaaatcgtg agggttcaag tccctctatc
601 ccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.72e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
603 |
584 |
2.72e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.