Match details
Record ID: |
KR703926.1 |
Database: |
nt |
Go to original record |
Description: |
Streptocarpus brevipilosus voucher Pocs T. s.n. tRNA-Leu (trnL) gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast. |
Taxon: |
Streptocarpus brevipilosus |
Original size: |
916 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
545 |
+ |
545 bp |
|
1 cgaaatcggt agacgctacg aacttaattg gattgagcct tggtatggaa
51 acctactaag tgaagacttt caaattcaga gaaaccctgg aattaataaa
101 aatgggcaat cctgagccaa atccttgttt tctcaaaaca agggttcaga
151 gagcgaaaaa gaggataggt gcagagactc aatggaagct gttctaacaa
201 atggagttga ctgcgttggt agaggaattg aaacttcaga aaggatgaaa
251 cgtatctatt gaatactatt gatcattaat aatggcccac atctgtatct
301 gggtttttgt atatgaaaaa tggaggaatt ggtgtgaatt gatttcacat
351 tgataaaaga atcgaatatt cattgatcaa atcattgacc ccatagtccg
401 ataggtctct taaagaattg attattcgga cgagaataaa gatagagtcc
451 cgttctacat gtcaataccg acaacaatgg aacttatagt aagaggaaaa
501 tccgtcgact ttaaaaatcg tgagggttca agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.45e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
545 |
526 |
2.45e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.