Match details
Record ID: |
ON598327.1 |
Database: |
nt |
Go to original record |
Description: |
Zygophyllum xanthoxylon voucher MQ045 chloroplast, complete genome. |
Taxon: |
Zygophyllum xanthoxylum |
Original size: |
105375 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47012 |
47543 |
+ |
532 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acatactaag tgatcacttt caaattcaga gaaaccctgg aattagaaat
101 gggcaatcct gagccaaatc ctgttttcaa aaaaaaaaga attcaattaa
151 aagaatcaaa aaaggatagg tgcagagact caatggaagc tgttctaaaa
201 aatggagttg actgctgcat tacattagtc aagtcaagta atccttgcat
251 cgaaattttc aaaaagataa aggataacct ttctttctat aaaactataa
301 aaaaaaagac tttatgaatc aattcgaagt tgaagaaaga atcaaatatg
351 atttgataaa atcatttact ccaaagtctg atatatcttt ttcaaaatgg
401 attagtcaga tgagaataaa gatagagtcc cattctatat gtcagtattt
451 acaattgaca acaatgaaat ttatagtgag aggaaaatcc gtcgatttta
501 taaatcgtga gggttcaagt ccctctatcc cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.39e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
532 |
513 |
2.39e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.