Match details
Record ID: |
LC057530.1 |
Database: |
nt |
Go to original record |
Description: |
Binary vector pMpGWB314 DNA, complete sequence. |
Taxon: |
Binary vector pMpGWB314 |
Original size: |
13890 bp |
View other 22 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
2 |
0 |
6600 |
6794 |
- |
195 bp |
|
1 gcacctacaa atgccataat tgcgataaag gaaaggctat cgttcaagat
51 gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gtgatatctc cactgacgta agggatgacg cacaatccca ctatc
View other 123 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
94.1 |
17 bp |
1 |
0 |
1 |
17 |
1.86e-05 |
primerB |
100.0 |
20 bp |
0 |
0 |
195 |
176 |
9.28e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.