Match details
Record ID: |
ON872375.1 |
Database: |
nt |
Go to original record |
Description: |
Gynostemma longipes chloroplast, complete genome. |
Taxon: |
Gynostemma longipes |
Original size: |
157765 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
49188 |
49802 |
+ |
615 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101 gggcaatcct gagccaaatc ctttttccga aaacaaatca aataagggat
151 tcgaaagcga taaaaaaaag gggggtaggt gcagagactc aatggaagct
201 gttctaacaa atgagttgcc taggttgcgt tagtaaagga atgaatcctt
251 ccatcgaaac tccagaaaag atgaaagata aacgtatata cgtactgaaa
301 tactatttga ttaatgacga cccgaatctc tattttttat agttatctaa
351 aaaatgatat atatatatat aaaaaacgaa ttgttattaa tcgattccaa
401 tatctccaag ttgaaaaaag aatcgaatat tcattgatca aatcatttac
451 tccatcgtag tctgatagat cttttgaaga actgattaat cagatgagaa
501 tagaataaag atagagtccc attctacatg tcaataccga caaaaatgaa
551 atttatagta agaggaaaat ccgtcgactt aaaaaaatcg tgagggttca
601 agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.77e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
615 |
596 |
2.77e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.