JRC GMO-Amplicons | EURL GMFF

Record ID:	OP903121.1
Database:	nt	Go to original record
Description:	Lantana camara chloroplast, complete genome.
Taxon:	Lantana camara
Original size:	154394 bp

Method:	QL-PLN-00-007	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Qualitative PCR method for detection of chloroplast tRNA-Leu intron (ISO/FDIS 21569:2005).
Target:	chloroplast tRNA-Leu (trnL) intron

View other 20492 matches for this method

Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
0	0	48210	48778	+	569 bp

Amplicon:

569 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   aacgccaaag gcggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgtgagg tagaggaatc tttccatcga aacttcagaa
251   aggatgaagg ataaacgtat ctattgaata ctctatcaaa atcaaatgat
301   taatgatggc ccgaatctgt atctgtattt ttttatatga aaaatggaag
351   aattggtgtg aattgattcc ccattgaaga aagaatcaaa tagtccttca
401   tcaaatcatt cactccacag tccgataaat cttttaaaga acccattaat
451   cggacgagaa taaagataga gtcccattct acatgtcaat accggcaaca
501   attaaattta tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg
551   ttcaagtccc tctatcccc

Primers alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	20 bp	0	0	1	20	2.56e-08
primerB	100.0	20 bp	0	0	569	550	2.56e-08

Match details