Match details
Record ID: |
OP779244.1 |
Database: |
nt |
Go to original record |
Description: |
Impatiens huangyanensis chloroplast, complete genome. |
Taxon: |
Impatiens huangyanensis |
Original size: |
152228 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
46206 |
46774 |
+ |
569 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtttt tggaaaacaa atccaaataa
151 agattccgaa acccaaaata gaaaaaggat aggtgcagag actcaatgga
201 agctgttcta acaaatggag ttgactgcgt tggtagagga attcctggat
251 cgaaacttca gaaagtatga aagaaaaaca tatatacata tgcataagaa
301 aataaatgac gatccaaaag cgtatccgtt ttttttagga aaaagtggtt
351 gtgaatcgat tccatattga ataaagaatc aaatattcat tggtcaaatc
401 attcactcca gactccatag tctgatagtt cctcggaaga actgattaat
451 cagacgagaa taaagataga gtcccattat acatgtcaat ccggacaaca
501 atgaaattta tagtaatagg aaaatccgtc gactttagaa atcgtgaggg
551 ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.56e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
569 |
550 |
2.56e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.