Match details
Record ID: |
ON456286.1 |
Database: |
nt |
Go to original record |
Description: |
Primulina eburnea isolate SZY02 voucher LSFC29-1 chloroplast, complete genome. |
Taxon: |
Primulina eburnea |
Original size: |
153242 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47640 |
48191 |
+ |
552 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctaccaag tgaagacttt caaattcaga gaaaccctgg aattaataaa
101 aatgggcaat cctgagccaa atccttgttt tctcaaaaca agggttcaga
151 gagcgaaaaa gaggataggt gcagagactc aatggaagct gttctaacaa
201 atggagttga ccacgttggt agaagaattg aaacttcaga aaggatgaag
251 gataaacgta tctattgaat actattgatg attaataatg gcccgaatct
301 gtatctgggt attttctata tgaaaaatag aagaattggt gtgaattgat
351 ttcacattga taaaagaatc gaatatttat tagtcaaatc attcactcca
401 cagtccgata gatctcttaa agaacttatt attcggacga gaataaagat
451 agagtcccgt tctacatgtc aataccggca acaatgaaac ttatagtaag
501 aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt ccctctatcc
551 cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.48e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
552 |
533 |
2.48e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.