Match details
Record ID: |
MW309819.1 |
Database: |
nt |
Go to original record |
Description: |
Plantago asiatica clone CQC chloroplast, complete genome. |
Taxon: |
Plantago asiatica |
Original size: |
164939 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
146464 |
147048 |
- |
585 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactagg tgataacttt caaattcaga gaaaccccgg aattaaaaaa
101 aaaaaatggg caatcctgag ccaaatcctg tcttctcaaa ataaaggttc
151 ataaagcgaa aaggggatag gtgcagagac tcgatggaag ctgttctaaa
201 acaaatggag ttgactgcgt tggtagatga atcttttcat cgaaacttca
251 gaaaagatga aggataaacg gatctattga atactaaaat atctaaaaaa
301 aagaaatgac ggcccgagtc tgcatctgta tttttttaga tgaaaaatag
351 aagaattggt gggaattgat tccacattca agaaagaatc gaatattcat
401 tcatcaaatc accccactcc atagtctgat agttttagtc tttttttaaa
451 gaactgatta attaattgga caagaataaa gatagagtcc cgttctacat
501 gtcaataccg acagcaatga aatttatagt aataggaaaa tccgtcgact
551 tttaaaatcg tgagggttca agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.63e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
585 |
566 |
2.63e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.