Match details
Record ID: |
OL891938.1 |
Database: |
nt |
Go to original record |
Description: |
Elsholtzia splendens voucher YSG_KIOM-2018-92 chloroplast, complete genome. |
Taxon: |
Elsholtzia splendens |
Original size: |
151280 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45952 |
46522 |
+ |
571 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aacgggcaat cctgagccaa atcctgtttt ctcaaaacca aaacaaaggt
151 tcaaaaaacg aaaaaaaaaa agggataggt gcagagactc aatggaagct
201 gttctaacaa atggagttga ctgcgctggg tagaggaatc tttccatgga
251 aactttagaa aggatgaaga ataaacgcat ctagtgaata ctatatcaaa
301 tggttaatga taggcccaaa tctgtttttt ttttatttta atataaaaaa
351 tagaaaaatt tgtgtgaatt gattccacgt tgaagaaaaa attgaatatt
401 catcacctca ttcactccat agtccgatac atcttttaaa gaattgatta
451 atcgaacgag aataaagata gagtcccatt ctacatgtca ataccggcaa
501 caatgaaatt tatagtaaga ggaaaatccg tcgactttaa aaatcgtgag
551 ggttcaagtc cctctatccc c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.57e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
571 |
552 |
2.57e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.