Match details
Record ID: |
MZ484966.1 |
Database: |
nt |
Go to original record |
Description: |
Tocoyena bullata voucher Borges 343 (ALCB) trnT-trnL intergenic spacer and tRNA-Leu (trnL) gene, partial sequence; chloroplast. |
Taxon: |
Tocoyena bullata |
Original size: |
1698 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
746 |
1312 |
+ |
567 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51 acccactaag tgataacttt caaattcaga garaccctgg aattaataaa
101 aaggggcaat cctgagccaw atcccgtttt ccgaaaccaa aggttcagaa
151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201 ggagttggct acgttagtag agaaatcttt ccatctaaaa ttccgaaagg
251 ataaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg
301 attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa
351 ttggtgtgaa tagattccac attgaagaag gaatcgaata ttcattgatc
401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg
451 gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat
501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551 caagtccctc tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.55e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
567 |
548 |
2.55e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.