Match details
Record ID: |
MZ466561.1 |
Database: |
nt |
Go to original record |
Description: |
Tocoyena formosa voucher Borges 340 trnT-trnL intergenic spacer and tRNA-Leu (trnL) gene, partial sequence; chloroplast. |
Taxon: |
Tocoyena formosa |
Original size: |
1721 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
783 |
1354 |
+ |
572 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51 acccactaag tgaagtgata actttcaaat tcagagaaac cctggaatta
101 ataaaaaggg gcaatcctga gccaaatccc gttttccgaa accaaaggtt
151 cagaaagtga aaaaaggata ggtgcagaga ctcaacggaa gctgttctaa
201 caaatggagt tggctacgtt agtagagaaa tctttccatc taaaattccg
251 aaaggataaa gtgaaggata aacgtatata tacgtattga atactatatc
301 aaatgattaa tgacgactcg actgaatctg tattttttat atgaaaacgg
351 aagaattggt gtgaatagat tccacattga agaaggaatc gaatattcat
401 tgatcaaatg attcactcca tagtctgata gatcttttca agaattgatt
451 aatcggacga gaataaagat agagtcccgt tctacatgtc aatgtcggca
501 acaatgaaat ttatagtaag aggaaaatcc gtcgacttta aaaatcgtga
551 gggttcaagt ccctctatcc cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.58e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
572 |
553 |
2.58e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.