Match details
Record ID: |
MZ458130.1 |
Database: |
nt |
Go to original record |
Description: |
Melanoxerus suavissimus voucher Razafimandimbison 496 (UPS) tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Melanoxerus suavissimus |
Original size: |
1737 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
813 |
1379 |
+ |
567 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tnggtatgaa
51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcataa
151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201 ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg
251 ataaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg
301 attaatgacg actcgactga atctatattt tttatatgaa aacggaagaa
351 ttggtgtgaa tagattccac attgaagaag gaatcgaata ttcattgatc
401 aaatgattca ctccatagtt tgatagatct tttcaagaat tgattaatcg
451 gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat
501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551 caagtccctc tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.55e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
567 |
548 |
2.55e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.