Match details
Record ID: |
MZ573793.1 |
Database: |
nt |
Go to original record |
Description: |
Koenigia mollis var. mollis voucher SD400 chloroplast, complete genome. |
Taxon: |
Koenigia mollis var. mollis |
Original size: |
158578 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47483 |
48073 |
+ |
591 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51 acctactaag tgataatttt caaattcaga gaaaccctgg aattaaaaaa
101 atgggcaatc ctgagccaac tcctgctttc caaaagtaag cataaaaaaa
151 ggataggtgc agagactcaa tggaagctgt tctaacaaat ggagttgact
201 gtcatgcgtt gtgatatgtt ataagaattc ttccataaaa attccaaaaa
251 ggatgaagaa gaaacctcta ggcatacgta cttaactata aatactatat
301 actataatat aaatataata ttgatgacga cccgaatctt tattttatga
351 atatgaacaa ataaaataat tattatgaat cgattccaag ttgaagaaag
401 aatcgaatat tcgtttctta aattaaagca tttactccac agtctgatag
451 atcttttgaa gaaccgatcc gtcggatgag aatgaagata gagtcccatt
501 ctacgtgtca atctcgacaa caatgaaatt tatagtaaga ggaaaatccg
551 tcgactttat aaatcgtgag ggttcaagtc cctctatccc c
View other 1 match with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.66e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
591 |
572 |
2.66e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.