Match details
Record ID: |
ON641301.1 |
Database: |
nt |
Go to original record |
Description: |
Plantago lagopus isolate BPTPS040 voucher LISE:96371 chloroplast, complete genome. |
Taxon: |
Plantago lagopus |
Original size: |
150210 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
46476 |
47057 |
+ |
582 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactagg tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtctt ctcaaaataa aggttcagaa
151 agcgagaaaa agggataggt gcagagactc gatggaagct gttctaaaac
201 aaatggagtt gactgcgttg gtagataaat tttttcatcg aaacttcaga
251 aaggatgaag gataaacgta tctatttttt tgaatactaa aatatctaaa
301 aaaatgaatg acggcccgag tcggtatctg tatttttttt tagatcaaag
351 atggaagaat tggtgtgaat tgattccaca ttcaagaatg aatcgaatat
401 tcattcatca aatcacccca ctccatagtc tgatagttct ttttaaaaag
451 aacttatatt aattggacga gaataaagat agagtcccgt tctacatgtc
501 aataccgaca gcaatgaaat ttatagtaat aggaaaatcc gtcgactttt
551 aaaatcgtga gggttcaagt ccctctatcc cc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.62e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
582 |
563 |
2.62e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.