Match details
Record ID: |
MW751819.1 |
Database: |
nt |
Go to original record |
Description: |
Verbascum thapsus chloroplast, complete genome. |
Taxon: |
Verbascum thapsus |
Original size: |
153392 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47904 |
48471 |
+ |
568 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctatttt ctcaaaacaa aggttcagaa
151 ggcgaaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat
201 ggagttgact gcgttggtag aggaatcttt ccatcgaaac ttcagaaagg
251 gtgacggata aacgtatcta ttgaatacta tatcaaatga ttaatgatgg
301 cccgaatctg tatctttttt ttttttatat atgaaaaatg gaaaaatcga
351 tgtgaattta ttccacattg aagaaagaat caaataaaat attcattcat
401 caaatcattc actccatagt ctgatagatc ttttaaagaa ctgattaatc
451 ggacgagaat aaagatagag tcccattcta catgtcaata tcggcaacaa
501 tgaaatttat agtaagagga aaatccgtcg actttaaaaa tcgtgagggt
551 tcaagtccct ctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.56e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
568 |
549 |
2.56e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.