Match details
Record ID: |
MW752361.1 |
Database: |
nt |
Go to original record |
Description: |
Fagopyrum leptopodum var. leptopodum chloroplast, complete genome. |
Taxon: |
Fagopyrum leptopodum var. leptopodum |
Original size: |
159323 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
68202 |
68758 |
+ |
557 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51 acctactaag tgagaacttt caaattcaga gaaaccctgg aataaaaaaa
101 cggataatcc tgagccaact cctgctttcc aaaagaaaga ataaatacag
151 gataggtgca gagactcaat ggaagctgtt ctaacaaagc ggagttgact
201 gtattgcgtt gttataagaa ttcttccgtc aaaactcaaa aaaggatgaa
251 gaataaacct atatgcatac gtacgtaaat actaaaaaaa aaataataat
301 attgatgaca acccggatat ttattttatg acaaagaaga tatgaatcaa
351 tttcaaattg aagaaaaaat taaatattca tttattatta ttaaaagcta
401 ctcccaagtc tgatggatct tttaaagaac cgatccatcg gatgagaatg
451 aagatagagt cccattctac gtgtcaatcc tgacaacaat gaaatttata
501 gtaagaggaa aatccgtcga ctttataaat cgtgagggtt caagtccctc
551 tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.51e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
557 |
538 |
2.51e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.