Match details
Record ID: |
MZ954872.1 |
Database: |
nt |
Go to original record |
Description: |
Scutellaria microviolacea chloroplast, complete genome. |
Taxon: |
Scutellaria microviolacea |
Original size: |
152092 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
47744 |
48294 |
+ |
551 bp |
|
1 cgaaatcggt agacgctacg gacttaatta gattgagcct tgatgtggga
51 aacctactaa gtgataactt tcaaattcag agaaaccccg gaattaataa
101 aaatgggtga tcctgatcca aatcctgttt tctgaaaaca aaggctcaaa
151 aaatgaaaaa tgggataggt gcagagactc gatggaagct gttctaacaa
201 atggagttag ctgcgttgtt agaggaatcc tttccgcgga aacttcagaa
251 aggataaacg tatctattga atactatatc aaatgattaa tgatggcccg
301 aatctgtatt tttgaatatg aaaaacggaa gaatcggtgt gaattgattc
351 cacattgaaa aaaaaaatgg aatattcatt catcaaatca ttcactccac
401 ggtccaatag gtcttttaaa gaactaatta atcggacgag aataaagata
451 gagtcccatt ctacatgtca ataccggcaa caatgaaatt tatagtaaga
501 ggaaaatccg tcgactttaa aaatcgtgag ggttcaagtc cctctatccc
551 c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.48e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
551 |
532 |
2.48e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.