Match details
Record ID: |
MW357053.1 |
Database: |
nt |
Go to original record |
Description: |
Poa petrosa voucher CAN:Rodrigez & Catalan s.n. trnT-trnL intergenic spacer, partial sequence; tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast. |
Taxon: |
Poa petrosa |
Original size: |
1778 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
830 |
1420 |
+ |
591 bp |
|
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251 ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag
301 atagcaaacg attaatcaca gagcccatat tataatataa tattggttct
351 ttattctttt ttagaatgaa atttgaaata gaaatgatta tgaaataaaa
401 aattcatatc gaatatttag taatcaaatc cttcagttca aagttttgag
451 gtctttaaaa aagtggatta atcggacgag gacaaagaga gagtcccatt
501 ctacatgtca atactgacaa caatgaaatt tctagtaaaa ggaaaatccg
551 tcgactttat aagtcgtgag ggttcaagtc cctctatccc c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.66e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
591 |
572 |
2.66e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.