Match details
Record ID: |
KF647530.1 |
Database: |
nt |
Go to original record |
Description: |
Chloroplast transformation vector pC35-STDBxb1, complete sequence. |
Taxon: |
Chloroplast transformation vector pC35-STDBxb1 |
Original size: |
12759 bp |
View other 24 matches for this record
View other 1686 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
6353 |
6489 |
- |
137 bp |
|
1 cgggggatct ggattttagt actggatttt ggttttagga attagaaatt
51 ttattgatag aagtatttta caaatacaaa tacatactaa gggtttctta
101 tatgctcaac acatgagcga aaccctatag gaaccct
View other 1594 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
2.06e-09 |
primerB |
100.0 |
23 bp |
0 |
0 |
137 |
115 |
1.68e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.